HPRD - Human Protein Reference Database | Tool name | HPRD - Human Protein Reference Database |
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| URL | http://www.hprd.org |
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| Important features | A human protein database that integrates literature curated protein information such as protein-protein interactions, post-translational modifications, enzyme/substrate relationships, disease associations, tissue expression, and sub-cellular localization. It also has 'Human Proteinpedia', a community portal for sharing and integration of human protein data. |
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| Citations | Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, Surendranath V, Niranjan V, Muthusamy B, Gandhi TK, Gronborg M, Ibarrola N, Deshpande N, Shanker K, Shivashankar HN, Rashmi BP, Ramya MA, Zhao Z, Chandrika KN, Padma N, Harsha HC, Yatish AJ, Kavitha MP, Menezes M, Choudhury DR, Suresh S, Ghosh N, Saravana R, Chandran S, Krishna S, Joy M, Anand SK, Madavan V, Joseph A, Wong GW, Schiemann WP, Constantinescu SN, Huang L, Khosravi-Far R, Steen H, Tewari M, Ghaffari S, Blobe GC, Dang CV, Garcia JG, Pevsner J, Jensen ON, Roepstorff P, Deshpande KS, Chinnaiyan AM, Hamosh A, Chakravarti A, Pandey A. Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Res. 2003 Oct;13(10):2363-71. PubMed PMID: 14525934; PubMed Central PMCID: PMC403728. |
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| Year of publication | 2003 |
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| Rank by usage frequency | 99 |
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| Comments | Note as per the resource: "Everything in HPRD is free as long as it is not used for commercial purposes. Commercial entitites will have to pay a fee under a licensing arrangement which will be used to make this database even better". |
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| Function | Proteomic, Other technique(s), Multiple techniques, Human |
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| Category | Online, Free |
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| Working status | Functional |
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| Other features | |
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| Other citations | 1. Mishra GR, Suresh M, Kumaran K, Kannabiran N, Suresh S, Bala P, Shivakumar K, Anuradha N, Reddy R, Raghavan TM, Menon S, Hanumanthu G, Gupta M, Upendran S, Gupta S, Mahesh M, Jacob B, Mathew P, Chatterjee P, Arun KS, Sharma S, Chandrika KN, Deshpande N, Palvankar K, Raghavnath R, Krishnakanth R, Karathia H, Rekha B, Nayak R, Vishnupriya G, Kumar HG, Nagini M, Kumar GS, Jose R, Deepthi P, Mohan SS, Gandhi TK, Harsha HC, Deshpande KS, Sarker M, Prasad TS, Pandey A. Human protein reference database--2006 update. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D411-4. PubMed PMID: 16381900; PubMed Central PMCID: PMC1347503. 2. Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, Kumar S, Mathivanan S, Telikicherla D, Raju R, Shafreen B, Venugopal A, Balakrishnan L, Marimuthu A, Banerjee S, Somanathan DS, Sebastian A, Rani S, Ray S, Harrys Kishore CJ, Kanth S, Ahmed M, Kashyap MK, Mohmood R, Ramachandra YL, Krishna V, Rahiman BA, Mohan S, Ranganathan P, Ramabadran S, Chaerkady R, Pandey A. Human Protein Reference Database--2009 update. Nucleic Acids Res. 2009 Jan;37(Database issue):D767-72. Epub 2008 Nov 6. PubMed PMID: 18988627; PubMed Central PMCID: PMC2686490. |
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